SubtiBank SubtiBank
yrbE [2018-02-13T01:05:00.000Z]
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yrbE [2018-02-13T01:05:00.000Z]

similar to dehydrogenase
locus
BSU27770
pI
5.71
mw
37.63 kDa
protein length
341 aa Sequence Blast
gene length
1023 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    2,838,847 → 2,839,872

    The protein

    Protein family

  • gfo/idh/mocA family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|03BE6DA854612B3F6741E0E167AB310F0DE96285|YfiI], [protein|29DAF5343A42EAD8DB97925FE7D049410F7B7FCA|NtdC], [protein|484D17480DFAD3667E0EBC6D38854A7546A8DB46|YteT], [protein|920C5750CB95102B073C32874D512E8D636D2C7D|IolU], [protein|7DFE74C751A67CCC84579D52005E1399B0A10166|IolW], [protein|AA7DCEFB17FD6F9C4F65235E9A247A6EC2242B06|IolX], [protein|93C1DF93CAFC5AE726523A91A3BA7470017FF6DC|IolG]

    • Structure

  • [PDB|3EUW] (from ''Corynebacterium glutamicum'', 38% identity, 52% similarity)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Biological materials

    Mutant

  • MGNA-A822 (yrbE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/822 NBRP B. subtilis, Japan]
  • BKE27770 (Δ[gene|942BAE9FA023DFCA06B6D26A856A72F2979E23FA|yrbE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGCTTCTTCCCCCTTGA, downstream forward: _UP4_TAATCTAACAGGATTACAAT
  • BKK27770 (Δ[gene|942BAE9FA023DFCA06B6D26A856A72F2979E23FA|yrbE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27770 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGCTTCTTCCCCCTTGA, downstream forward: _UP4_TAATCTAACAGGATTACAAT